Dependency rankings

Compare AI / ML libraries and shared infrastructure.

Ranked by distinct dependent records in the static graph, not execution frequency. Environments and installed versions stay separate.

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ML / AI dependencies

Frameworks, classical ML, native ML libraries, and supporting ML/GPU packages with recorded dependents.

ML and AI dependencies. Counts of distinct dependent records, not runtime usage frequency.
Dependency	Direct	Incl. indirect
scikit-learn1.4.2 · CoreML library Inspect 11 direct dependents 2 metadata-declared; 11 linked by static import, native link, or asset evidence. These sets may overlap. arcimboldo aleph component coot chemical feature clustering component libtbx covariance helpers component phasertng matthews ml component slicendice component struvolpy component conkit pydist dials pydist metalcoordanalysis pydist panddas pydist ridl pydist	11	12
scikit-learn1.6.1 · pandda2ML library Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hdbscan pydist pandda-2-gemmi pydist pynndescent pydist umap-learn pydist	4	4
PyTorch (torch)1.13.1 · pandda2AI / ML framework Inspect 3 direct dependents 3 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist pytorch-lightning pydist torchmetrics pydist	3	3
nvidia-cublas-cu1111.10.3.66 · pandda2GPU support Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. nvidia-cudnn-cu11 pydist torch pydist	2	5
nvidia-cuda-nvrtc-cu1111.7.99 · pandda2GPU support Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. torch pydist	1	4
nvidia-cuda-runtime-cu1111.7.99 · pandda2GPU support Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. torch pydist	1	4
nvidia-cudnn-cu118.5.0.96 · pandda2GPU support Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. torch pydist	1	4
fms_nnmodel.soVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. fmslib component	1	3
doublehelix_nnmodel.soVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. doublehelix pydist	1	2
ONNX Runtime1.19.2 · CoreAI / ML framework Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. nucleofind pydist	1	2
optuna4.5.0 · CoreML library Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. dials pydist	1	2
torchmetrics1.5.2 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytorch-lightning pydist	1	2
cbuccaneerNNVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. buccaneer nn component	1	1
phasertng_ext.soVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. phasertng matthews ml component	1	1
hdbscan0.8.42 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
pytorch-lightning2.2.5 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
ray2.51.2 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
umap-learn0.5.12 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1

Showing 15 of 18 dependencies

Most shared dependencies

Shipped software with the most incoming dependencies. Unresolved JavaScript declarations are excluded; native linkage coverage is partial.

Most shared dependencies. Counts of distinct dependent records, not runtime usage frequency.
Dependency	Direct	Incl. indirect
numpy1.26.4 · Core Inspect 33 direct dependents 31 metadata-declared; 2 linked by static import, native link, or asset evidence. These sets may overlap. fmslib component phasertng matthews ml component acedrg pydist biopython pydist bokeh pydist conkit pydist contourpy pydist csb pydist h5py pydist imageio pydist matplotlib pydist metalcoordanalysis pydist modelcraft pydist mrcfile pydist nucleofind pydist nxmx pydist onnxruntime pydist optuna pydist pairef pydist pandas pydist panddas pydist pyfftw pydist pythran pydist rabdam pydist reciprocalspaceship pydist ridl pydist scikit-image pydist scikit-learn pydist scipy pydist seaborn pydist servalcat pydist tifffile pydist wxpython pydist	33	45
numpy1.26.4 · pandda2 Inspect 17 direct dependents 17 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist contourpy pydist hdbscan pydist imageio pydist matplotlib pydist numba pydist pandas pydist pandda-2-gemmi pydist pytorch-lightning pydist rdkit pydist scikit-image pydist scikit-learn pydist scipy pydist seaborn pydist tifffile pydist torchmetrics pydist umap-learn pydist	17	18
packaging24.2 · Core Inspect 15 direct dependents 15 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist hatchling pydist lazy-loader pydist matplotlib pydist meson-python pydist onnxruntime pydist optuna pydist pyproject-metadata pydist pyqt-builder pydist pytest pydist scikit-build-core pydist scikit-image pydist servalcat pydist setuptools-scm pydist sip pydist	15	32
libgcc16.2.0 · abcfold Inspect 14 direct dependents 14 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bzip2 conda libexpat conda libffi conda liblzma conda libnsl conda libpython conda libsqlite conda libuuid conda libxcrypt conda ncurses conda openssl conda python conda readline conda tk conda	14	18
libgcc16.2.0 · pandda2 Inspect 13 direct dependents 13 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bzip2 conda libexpat conda libffi conda liblzma conda libnsl conda libsqlite conda libuuid conda libxcrypt conda ncurses conda openssl conda python conda readline conda tk conda	13	25
python3.9.23 · pandda2 Inspect 12 direct dependents 12 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. colorama conda exceptiongroup conda iniconfig conda packaging conda pip conda pluggy conda pygments conda pytest conda setuptools conda tomli conda typing-extensions conda wheel conda	12	12
scipy1.13.1 · Core Inspect 11 direct dependents 11 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. conkit pydist csb pydist metalcoordanalysis pydist modelcraft pydist nxmx pydist rabdam pydist reciprocalspaceship pydist ridl pydist scikit-image pydist scikit-learn pydist servalcat pydist	11	21
scikit-learn1.4.2 · CoreML library Inspect 11 direct dependents 2 metadata-declared; 11 linked by static import, native link, or asset evidence. These sets may overlap. arcimboldo aleph component coot chemical feature clustering component libtbx covariance helpers component phasertng matthews ml component slicendice component struvolpy component conkit pydist dials pydist metalcoordanalysis pydist panddas pydist ridl pydist	11	12
six1.12.0 · Core Inspect 9 direct dependents 9 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bcrypt pydist cryptography pydist cycler pydist mock pydist onedep-api pydist pynacl pydist python-dateutil pydist ridl pydist wxpython pydist	9	24
typing-extensions4.14.1 · pandda2 Inspect 9 direct dependents 9 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiosignal pydist beautifulsoup4 pydist exceptiongroup pydist lightning-utilities pydist multidict pydist pandda-2-gemmi pydist pytorch-lightning pydist referencing pydist torch pydist	9	17
packaging26.3 · pandda2 Inspect 9 direct dependents 9 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist lazy-loader pydist lightning-utilities pydist matplotlib pydist pytest pydist pytorch-lightning pydist ray pydist scikit-image pydist torchmetrics pydist	9	11
pandas2.1.4 · Core Inspect 9 direct dependents 9 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. conkit pydist metalcoordanalysis pydist modelcraft pydist panddas pydist rabdam pydist reciprocalspaceship pydist ridl pydist seaborn pydist servalcat pydist	9	10
gemmi0.7.5 · Core Inspect 8 direct dependents 8 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. acedrg pydist adding-stats-to-mmcif pydist metalcoordanalysis pydist modelcraft pydist nucleofind pydist reciprocalspaceship pydist ridl pydist servalcat pydist	8	8
setuptools79.0.1 · Core Inspect 7 direct dependents 7 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. kiwisolver pydist pyfftw pydist pythran pydist rabdam pydist reciprocalspaceship pydist setuptools-scm pydist sip pydist	7	17
requests2.28.2 · Core Inspect 7 direct dependents 7 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. adding-stats-to-mmcif pydist dials-data pydist dui2 pydist modelcraft pydist nucleofind pydist onedep-api pydist rabdam pydist	7	8
matplotlib3.6.3 · Core Inspect 7 direct dependents 7 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. conkit pydist csb pydist pairef pydist panddas pydist rabdam pydist ridl pydist seaborn pydist	7	7
pyyaml6.0.2 · Core Inspect 6 direct dependents 6 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist dials-data pydist omegaconf pydist optuna pydist pyjob pydist xia2 pydist	6	9
scipy1.13.1 · pandda2 Inspect 6 direct dependents 6 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hdbscan pydist pandda-2-gemmi pydist pynndescent pydist scikit-image pydist scikit-learn pydist umap-learn pydist	6	6
pillow11.3.0 · pandda2 Inspect 5 direct dependents 5 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist imageio pydist matplotlib pydist rdkit pydist scikit-image pydist	5	7
libzlib1.3.2 · pandda2 Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. libsqlite conda python conda tk conda zstd conda	4	17
python-dateutil2.8.2 · Core Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist nxmx pydist pandas pydist ridl pydist	4	15
joblib1.3.2 · Core Inspect 4 direct dependents 4 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. conkit pydist panddas pydist reciprocalspaceship pydist scikit-learn pydist	4	14
pillow11.3.0 · Core Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist imageio pydist matplotlib pydist scikit-image pydist	4	11
libzlib1.3.2 · abcfold Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. libsqlite conda python conda tk conda zstd conda	4	9
joblib1.5.3 · pandda2 Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hdbscan pydist pandda-2-gemmi pydist pynndescent pydist scikit-learn pydist	4	5
python3.11.17 · abcfold Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. packaging conda pip conda setuptools conda wheel conda	4	4
jinja23.1.4 · Core Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist panddas pydist poetry-dynamic-versioning pydist xia2 pydist	4	4
pytest7.3.2 · Core Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. panddas pydist pytest-faulthandler pydist pytest-forked pydist pytest-mock pydist	4	4
scikit-learn1.6.1 · pandda2ML library Inspect 4 direct dependents 4 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hdbscan pydist pandda-2-gemmi pydist pynndescent pydist umap-learn pydist	4	4
pyparsing3.1.4 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist ridl pydist svgwrite pydist	3	10
markupsafe2.0.1 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. jinja2 pydist mako pydist panddas pydist	3	9
setuptools79.0.1 · pandda2 Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. lightning-utilities pydist nvidia-cublas-cu11 pydist nvidia-cuda-runtime-cu11 pydist	3	8
typing-extensions4.10.0 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. alembic pydist bokeh pydist pint pydist	3	7
tqdm4.66.6 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. metalcoordanalysis pydist nucleofind pydist optuna pydist	3	6
attrs26.1.0 · pandda2 Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist jsonschema pydist referencing pydist	3	6
cffi1.14.6 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bcrypt pydist cryptography pydist pynacl pydist	3	4
pyyaml6.0.3 · pandda2 Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist pytorch-lightning pydist ray pydist	3	4
tqdm4.70.1 · pandda2 Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. gdown pydist pytorch-lightning pydist umap-learn pydist	3	4
h5py3.9.0 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. dui2 pydist hdf5plugin pydist nxmx pydist	3	3
networkx3.2.1 · Core Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. acedrg pydist metalcoordanalysis pydist scikit-image pydist	3	3
numpy1.26.4 · abcfold Inspect 3 direct dependents 3 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist biopython pydist pandas pydist	3	3
PyTorch (torch)1.13.1 · pandda2AI / ML framework Inspect 3 direct dependents 3 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist pytorch-lightning pydist torchmetrics pydist	3	3
ncurses6.6 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda readline conda	2	14
pytz2020.5 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist ridl pydist	2	11
cycler0.10.0 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist ridl pydist	2	8
kiwisolver1.0.1 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist ridl pydist	2	8
pluggy1.0.0 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hatchling pydist pytest pydist	2	7
wheel0.45.1 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. nvidia-cublas-cu11 pydist nvidia-cuda-runtime-cu11 pydist	2	7
ncurses6.6 · abcfold Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda readline conda	2	6
idna3.20 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist yarl pydist	2	6
nvidia-cublas-cu1111.10.3.66 · pandda2GPU support Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. nvidia-cudnn-cu11 pydist torch pydist	2	5
python-dateutil2.9.0.post0 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist pandas pydist	2	5
rpds-py0.27.1 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. jsonschema pydist referencing pydist	2	5
sqlalchemy1.4.54 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. alembic pydist optuna pydist	2	4
toml0.10.2 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. flit-core pydist sip pydist	2	4
contourpy1.3.0 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist matplotlib pydist	2	4
llvmlite0.43.0 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. numba pydist pynndescent pydist	2	4
referencing0.36.2 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. jsonschema pydist jsonschema-specifications pydist	2	4
pathspec0.10.3 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hatchling pydist scikit-build-core pydist	2	3
py1.11.0 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. dials-data pydist pytest-forked pydist	2	3
shiboken25.15.11 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pyside2 pydist shiboken2-generator pydist	2	3
packaging26.3 · abcfold Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. plotly pydist wheel pydist	2	3
urllib32.8.0 · abcfold Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist types-requests pydist	2	3
filelock3.19.1 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. gdown pydist ray pydist	2	3
lightning-utilities0.15.2 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytorch-lightning pydist torchmetrics pydist	2	3
numba0.60.0 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pynndescent pydist umap-learn pydist	2	3
pandas2.3.3 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist seaborn pydist	2	3
pygments2.19.2 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest pydist rich pydist	2	3
requests2.32.5 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. gdown pydist ray pydist	2	3
fmslibVersion not recorded · Core Inspect 2 direct dependents 0 metadata-declared; 2 linked by static import, native link, or asset evidence. These sets may overlap. checkmysequence pydist findmysequence pydist	2	2
biopython1.80 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. adding-stats-to-mmcif pydist conkit pydist	2	2
future1.0.0 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. acedrg pydist ridl pydist	2	2
gast0.5.4 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. beniget pydist pythran pydist	2	2
setuptools-scm8.3.1 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. flit-scm pydist hatch-vcs pydist	2	2
tabulate0.8.10 · Core Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. modelcraft pydist xia2 pydist	2	2
frozenlist1.8.0 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist aiosignal pydist	2	2
matplotlib3.9.4 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist seaborn pydist	2	2
multidict6.7.1 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist yarl pydist	2	2
propcache0.4.1 · pandda2 Inspect 2 direct dependents 2 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist yarl pydist	2	2
libgomp16.2.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. -openmp-mutex conda	1	27
-openmp-mutex4.5 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. libgcc conda	1	26
libgomp16.2.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. -openmp-mutex conda	1	20
-openmp-mutex4.5 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. libgcc conda	1	19
ca-certificates2026.7.22 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. openssl conda	1	14
zstd1.5.7 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ld-impl-linux-64 conda	1	14
bzip21.0.8 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
ld-impl-linux-642.46.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
libexpat2.8.5 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
libffi3.7.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
liblzma5.8.3 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
libnsl2.0.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
libsqlite3.54.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
libuuid2.42.4 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
libxcrypt4.4.38 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
openssl3.6.5 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
readline8.3 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
tk8.6.13 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
tzdata2026c · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	13
threadpoolctl2.2.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-learn pydist	1	13
tzdata2022.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist	1	11
certifi2026.1.4 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	9
charset-normalizer2.0.7 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	9
idna3.3 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	9
urllib31.26.7 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	9
contourpy1.0.7 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	8
fonttools4.22.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	8
ca-certificates2026.7.22 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. openssl conda	1	6
zstd1.5.7 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ld-impl-linux-64 conda	1	6
six1.17.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python-dateutil pydist	1	6
bzip21.0.8 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
ld-impl-linux-642.46.1 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libexpat2.8.5 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libffi3.7.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
liblzma5.8.3 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libnsl2.0.1 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libpython3.11.17 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libsqlite3.54.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libuuid2.42.4 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
libxcrypt4.4.38 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
openssl3.6.5 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
readline8.3 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
tk8.6.13 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
tzdata2026c · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python conda	1	5
iniconfig1.1.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest pydist	1	5
pycparser2.18 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. cffi pydist	1	5
threadpoolctl3.7.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-learn pydist	1	5
mako1.3.9 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. alembic pydist	1	4
certifi2026.7.22 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	4
charset-normalizer3.5.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	4
nvidia-cuda-nvrtc-cu1111.7.99 · pandda2GPU support Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. torch pydist	1	4
nvidia-cuda-runtime-cu1111.7.99 · pandda2GPU support Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. torch pydist	1	4
nvidia-cudnn-cu118.5.0.96 · pandda2GPU support Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. torch pydist	1	4
pytz2026.5 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist	1	4
tzdata2026.5 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist	1	4
urllib32.6.3 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	4
fms_nnmodel.soVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. fmslib component	1	3
alembic1.15.2 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. optuna pydist	1	3
antlr4-python3-runtime4.9.3 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. omegaconf pydist	1	3
colorlog4.1.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. optuna pydist	1	3
six1.17.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python-dateutil pydist	1	3
cycler0.12.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	3
fonttools4.60.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	3
importlib-resources6.5.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	3
jsonschema-specifications2025.9.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. jsonschema pydist	1	3
kiwisolver1.4.7 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	3
markupsafe3.0.4 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. jinja2 pydist	1	3
mdurl0.1.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. markdown-it-py pydist	1	3
pyparsing3.3.3 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. matplotlib pydist	1	3
soupsieve2.8.4 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. beautifulsoup4 pydist	1	3
packaging26.3 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. wheel conda	1	2
typing-extensions4.14.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. exceptiongroup conda	1	2
doublehelix_nnmodel.soVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. doublehelix pydist	1	2
importlib-resources6.3.2 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. dials-data pydist	1	2
omegaconf2.3.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. servalcat pydist	1	2
ONNX Runtime1.19.2 · CoreAI / ML framework Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. nucleofind pydist	1	2
optuna4.5.0 · CoreML library Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. dials pydist	1	2
trove-classifiers2023.11.29 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hatchling pydist	1	2
certifi2026.7.22 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	2
charset-normalizer3.5.2 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	2
idna3.20 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. requests pydist	1	2
markupsafe3.0.4 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. jinja2 pydist	1	2
narwhals2.27.1 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. plotly pydist	1	2
python-dateutil2.9.0.post0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist	1	2
pytz2026.5 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist	1	2
tzdata2026.5 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandas pydist	1	2
beautifulsoup44.15.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. gdown pydist	1	2
click8.1.8 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ray pydist	1	2
fsspec2025.10.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytorch-lightning pydist	1	2
imageio2.37.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	2
jinja23.1.6 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist	1	2
jsonschema4.25.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ray pydist	1	2
lazy-loader0.6 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	2
markdown-it-py3.0.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. rich pydist	1	2
msgpack1.1.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ray pydist	1	2
networkx3.2.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	2
protobuf6.33.6 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ray pydist	1	2
pynndescent0.6.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. umap-learn pydist	1	2
termcolor3.1.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. fire pydist	1	2
tifffile2024.8.30 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	2
torchmetrics1.5.2 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytorch-lightning pydist	1	2
tornado6.5.10 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist	1	2
xyzservices2026.9.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist	1	2
setuptools84.0.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pip conda	1	1
wheel0.48.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pip conda	1	1
colorama0.4.6 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
exceptiongroup1.3.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
iniconfig2.0.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
packaging26.3 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
pluggy1.6.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
pygments2.19.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
setuptools79.0.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pip conda	1	1
tomli2.2.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest conda	1	1
wheel0.45.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pip conda	1	1
cbuccaneerNNVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. buccaneer nn component	1	1
phasertng_ext.soVersion not recorded · CoreNative ML Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. phasertng matthews ml component	1	1
ascii-graph1.5.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. panddas pydist	1	1
asgiref3.6.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. django pydist	1	1
bcrypt3.1.7 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. paramiko pydist	1	1
beniget0.4.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pythran pydist	1	1
chardet3.0.4 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pyjob pydist	1	1
cryptography2.8 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. paramiko pydist	1	1
cython3.0.8 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. conkit pydist	1	1
dials3.30 · Core Inspect 1 direct dependents 0 metadata-declared; 1 linked by static import, native link, or asset evidence. These sets may overlap. xia2 pydist	1	1
dials-data2.4.143 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. xia2 pydist	1	1
doublehelix5.6.3 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. checkmysequence pydist	1	1
findmysequence1.0.28 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. checkmysequence pydist	1	1
flit-core3.3.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. flit-scm pydist	1	1
hatchling1.22.5 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. hatch-vcs pydist	1	1
imageio2.34.2 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	1
lazy-loader0.4 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	1
lxml4.9.4 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. python-docx pydist	1	1
msgpack1.0.8 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. reciprocalspaceship pydist	1	1
nucleofind1.3.2 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. modelcraft pydist	1	1
pdbecif1.5 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. acedrg pydist	1	1
pint0.23 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. nxmx pydist	1	1
ply3.11 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pythran pydist	1	1
prettytable3.3.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. conkit pydist	1	1
pycairo1.20.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pygobject pydist	1	1
pynacl1.3.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. paramiko pydist	1	1
pyproject-metadata0.8.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. meson-python pydist	1	1
pyqt5-sip12.15.0 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pyqt5 pydist	1	1
pyside25.15.11 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. dui2 pydist	1	1
seaborn0.13.2 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. ridl pydist	1	1
servalcat0.4.142 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. acedrg pydist	1	1
sip6.3.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pyqt-builder pydist	1	1
sqlparse0.4.3 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. django pydist	1	1
svgwrite1.3.1 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. iris-validation pydist	1	1
texttable1.6.4 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. igraph pydist	1	1
tifffile2024.12.12 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. scikit-image pydist	1	1
tornado6.2 · Core Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. bokeh pydist	1	1
biopython1.84 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
colorama0.4.6 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
jinja23.1.6 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
pandas2.2.3 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
plotly7.1.0 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
pyarrow19.0.1 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
requests2.34.2 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
tqdm4.70.1 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
types-requests2.33.0.20261006 · abcfold Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. abcfold pydist	1	1
aiohappyeyeballs2.6.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist	1	1
aiosignal1.4.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist	1	1
async-timeout5.0.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist	1	1
bokeh3.4.3 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
exceptiongroup1.3.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest pydist	1	1
fire0.7.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
gdown5.2.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
gemmi0.7.5 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
hdbscan0.8.42 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
iniconfig2.0.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest pydist	1	1
pluggy1.6.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest pydist	1	1
pytorch-lightning2.2.5 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
ray2.51.2 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
rdkit2025.9.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
rich15.0.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
scikit-image0.24.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
seaborn0.13.2 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
tomli2.2.1 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pytest pydist	1	1
umap-learn0.5.12 · pandda2ML library Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. pandda-2-gemmi pydist	1	1
yarl1.22.0 · pandda2 Inspect 1 direct dependents 1 metadata-declared; 0 linked by static import, native link, or asset evidence. These sets may overlap. aiohttp pydist	1	1

Showing 15 of 259 dependencies

Largest recorded ML-linked assets

File sizes, not total framework footprints. These assets have a static runtime-scope relationship to an ML-connected record; some are examples or optional third-party payloads.

Asset / consumer	MiB	Same-hash paths
dense_weight_0.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/dense_weight_0.bin 333,971,456 bytes	318.5	1
nucleofind-core.onnxnucleofind · Core File path and exact size lib/data/nucleofind_models/nucleofind-core.onnx 148,630,770 bytes	141.7	2
nucleofind-core.onnxnucleofind · Core File path and exact size lib/python3.11/site-packages/nucleofind_models/nucleofind-core.onnx 148,630,770 bytes	141.7	2
model_event.ckptpandda-2-gemmi · pandda2 File path and exact size share/mamba/envs/pandda2/lib/python3.9/site-packages/pandda_gemmi/cnn/model_event.ckpt 147,133,214 bytes	140.3	1
model_build.ckptpandda-2-gemmi · pandda2 File path and exact size share/mamba/envs/pandda2/lib/python3.9/site-packages/pandda_gemmi/cnn/model_build.ckpt 57,114,976 bytes	54.5	1
buccaneer_nn_weights.csvbuccaneer nn · Core File path and exact size lib/data/buccaneer_nn_weights.csv 32,954,882 bytes	31.4	1
conv3d_2_weight_0.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/conv3d_2_weight_0.bin 884,736 bytes	0.8	1
conv3d_1_weight_0.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/conv3d_1_weight_0.bin 221,184 bytes	0.2	1
trained_classifier.joblibconkit · Core File path and exact size lib/python3.11/site-packages/conkit/misc/trained_classifier.joblib 152,258 bytes	0.1	1
dense_1_weight_0.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/dense_1_weight_0.bin 12,288 bytes	0	1
squeeze.pthtorchmetrics · pandda2 File path and exact size share/mamba/envs/pandda2/lib/python3.9/site-packages/torchmetrics/functional/image/lpips_models/squeeze.pth 10,811 bytes	0	1
architecture.jsonphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/architecture.json 9,007 bytes	0	1
vgg.pthtorchmetrics · pandda2 File path and exact size share/mamba/envs/pandda2/lib/python3.9/site-packages/torchmetrics/functional/image/lpips_models/vgg.pth 7,289 bytes	0	1
alex.pthtorchmetrics · pandda2 File path and exact size share/mamba/envs/pandda2/lib/python3.9/site-packages/torchmetrics/functional/image/lpips_models/alex.pth 6,009 bytes	0	1
conv3d_weight_0.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/conv3d_weight_0.bin 3,456 bytes	0	1
cla.savslicendice · Core File path and exact size lib/python3.11/site-packages/slicendice/dice/scoresclassifier/classifier/cla.sav 1,163 bytes	0	1
dense_weight_1.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/dense_weight_1.bin 1,024 bytes	0	1
standard_scaler.joblibconkit · Core File path and exact size lib/python3.11/site-packages/conkit/misc/standard_scaler.joblib 777 bytes	0	1
sca.pklslicendice · Core File path and exact size lib/python3.11/site-packages/slicendice/dice/scoresclassifier/classifier/sca.pkl 777 bytes	0	1
logreg_iris.onnxonnxruntime · Core File path and exact size lib/python3.11/site-packages/onnxruntime/datasets/logreg_iris.onnx 670 bytes	0	1
conv3d_2_weight_1.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/conv3d_2_weight_1.bin 512 bytes	0	1
conv3d_1_weight_1.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/conv3d_1_weight_1.bin 256 bytes	0	1
mul_1.onnxonnxruntime · Core File path and exact size lib/python3.11/site-packages/onnxruntime/datasets/mul_1.onnx 130 bytes	0	1
conv3d_weight_1.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/conv3d_weight_1.bin 128 bytes	0	1
sigmoid.onnxonnxruntime · Core File path and exact size lib/python3.11/site-packages/onnxruntime/datasets/sigmoid.onnx 103 bytes	0	1
dense_1_weight_1.binphasertng matthews ml · Core File path and exact size lib/python3.11/site-packages/phasertng/tensorflow/mle_export/dense_1_weight_1.bin 48 bytes	0	1

Showing 10 of 26 asset paths

Each row is one recorded path. NucleoFind’s 141.7 MiB ONNX file appears twice with the same SHA-256: two shipped paths, one unique payload. MiB = 1,048,576 bytes.

How to read the counts

Direct counts distinct incoming source records. Including indirect counts all distinct upstream records reachable through the same graph; it already includes direct dependents. Cycles and duplicate edges do not inflate either count.

Only runtime-scope requires, conda_depends, imports, links, loads_asset and bundles_asset edges qualify, with both endpoints shipped in the same environment. This retains metadata declarations and cited static links; it does not prove a dependency ran.

Build, optional, external, provenance and ownership-only edges are excluded. In particular, unresolved JavaScript dependency declarations do not count as installed shared dependencies. This is a ranking of the recorded graph, not a complete native linkage census or a count of unique applications. Python and Conda records may overlap.

ML membership uses the CSV’s ml_family field on shipped software, not keyword matching. Package byte sizes are absent from the CSV; only the recorded asset sizes above can be compared.

Source: nodes.csv and edges.csv; ml_reach.csv identifies the connected consumers for the asset table. 580 qualifying edge rows, 570 unique source–target pairs, 259 software dependencies with incoming links.